Methodology & Academic Standards

Why StatClinic

An objective account of how StatClinic supports rigorous, reproducible statistical analysis for clinical and biomedical research — and how it differs from general-purpose statistical software.

1.Introduction

General-purpose statistical packages and spreadsheets are designed to compute whatever the user requests. They do not distinguish between a well-specified clinical analysis and a misapplied one: a spreadsheet will run a parametric test on non-normal data, or compute a p-value without an accompanying effect size, without objection. The responsibility for methodological correctness rests entirely with the user.

StatClinic is built around clinical and biomedical research workflows rather than generic calculation. Its structure reflects the sequence a careful analysis actually follows: define the research question, identify the variable types and study design, verify the assumptions of candidate tests, select an appropriate method, and report the result in a form suitable for a medical journal. The intent is not to replace statistical judgement, but to make the correct workflow the path of least resistance.

Scope StatClinic is an educational and research aid implementing standard, published statistical methods. It is not a substitute for a qualified biostatistician's review, an institutional review board, or a study's pre-registered statistical analysis plan.

2.Philosophy of Evidence-Based Statistical Analysis

Evidence-based medicine depends on analyses that are appropriate to the data, transparent in their assumptions, and reported completely enough to be appraised by others. StatClinic is designed to align with the reporting and methodological expectations of clinical trials and observational studies, including the principles reflected in reporting guidelines such as CONSORT (trials), STROBE (observational studies), and PRISMA (systematic reviews).

In practice this means the platform favours:

3.Assumption Checking Before Test Selection

The most common statistical errors in the medical literature stem from applying a test whose assumptions are unmet — most often a parametric test on non-normal data, or a regression model with severe multicollinearity. StatClinic makes assumption checking an explicit, guided step rather than an afterthought.

Honest limitation Assumption checking is presented as a guided, dedicated step — StatClinic does not silently overrule a user who chooses to proceed. The aim is to surface the relevant assumption at the right moment, not to prevent analysis.

4.Appropriate Test Selection

StatClinic's Test Finder Wizard implements an explicit decision tree that mirrors standard biostatistical teaching. By asking about the research goal, variable types, number of groups, independence of observations, and distributional assumptions, it narrows the field to a defensible method — which discourages the practice of trying several tests and reporting the most favourable (a form of p-hacking).

Step 1 — Research goal. Compare groups · test an association · predict an outcome · analyse survival · evaluate a diagnostic test · compare proportions.
Step 2 — Design. Number of groups; independent vs. related (paired / repeated) measurements.
Step 3 — Assumptions. Distribution of the outcome (or of paired differences); sample size considerations.
Step 4 — Recommended method. A single, appropriate test (e.g. independent t-test vs. Mann–Whitney U), reached by a transparent, reproducible route.

Because the path to each recommendation is fixed and visible, two researchers with the same study design arrive at the same method — a property general-purpose menus do not enforce.

5.Publication-Ready Outputs

Results are structured to match the reporting conventions of medical journals rather than the raw layout of a statistics engine. For each applicable analysis, StatClinic reports:

Citations for the software itself are provided in Vancouver, APA 7th, BibTeX, and RIS formats on the Cite StatClinic page, so the analytic tool and version can be recorded in a Methods section.

6.Clinical Research Workflow

StatClinic's method library is organised around the analyses that recur in clinical and biomedical research, rather than a generic list of procedures:

Research taskSupported methods
Diagnostic accuracyROC curve & AUC, DeLong comparison, Youden index, sensitivity, specificity, PPV/NPV, decision curve analysis
Survival / time-to-eventKaplan–Meier estimation, hazard ratios, Cox proportional-hazards regression
Risk & associationOdds ratio, relative risk, number needed to treat, logistic regression
Systematic reviewMeta-analysis with forest plots, heterogeneity (I², τ²), funnel plots, meta-regression
Agreement & reliabilityCohen's κ, intraclass correlation, Cronbach's α, Bland–Altman analysis
Group comparisont-tests, ANOVA family, non-parametric equivalents, post-hoc procedures

7.Reproducibility & Transparency

Reproducibility means that a stated analysis, applied to the same data, yields the same result — and that a reader can determine exactly what was done. StatClinic supports this in the following concrete ways:

Stated plainly StatClinic is proprietary software and is not open source; it does not execute or expose R or Python code. Its transparency rests on validated, documented, and versioned methods with full method references — not on distributing source code. This is stated openly so that no reproducibility claim can be misread. See the License page for details.

8.Academic Documentation & Citation Support

Every supported method is accompanied by documentation describing when it applies, the assumptions it requires, the quantities it reports, and worked clinical examples — written to be usable directly when drafting a Methods section. The Documentation page consolidates the available methods, a getting-started workflow, frequently asked questions, and the version history.

For the software itself, formal citations are provided in Vancouver, APA 7th, BibTeX, and RIS formats, with fields reserved for a DOI and, in future, a peer-reviewed software or validation paper — so that citations remain stable as the platform's academic record grows. Researchers can add the software citation to their reference list directly from the Cite StatClinic page.

In summary StatClinic aims to be a tool a clinical researcher can defend in peer review: appropriate methods, checked assumptions, complete reporting, validated computation, and a clear, honest account of what the software does and does not do.